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发布者:中国科学院生物物理研究所蛋白质科学研究平台 时间:2016年09月04日

[1] Yu J, Zhang H, Zhang M, Deng Y, Wang H, Lu J, Xu T, Xu P(2013).An aromatic amino acid in the coiled-coil 1 domain plays a crucial role in the auto-inhibitory mechanism of STIM1.Biochem J454(3):401-9

[2] Chen JJ, Jing J, Chang H, Rong Y, Hai Y, Tang J, Zhang JL, Xu P(2013).A sensitive and quantitative autolysosome probe for detecting autophagic activity in live and prestained fixed cells.Autophagy9(6):894-904

[3] Yang S, Liu X, Li X, Sun S, Sun F, Fan B, Zhao S(2013).MicroRNA-124 reduces caveolar density by targeting caveolin-1 in porcine kidney epithelial PK15 cells.Mol Cell Biochem[Epub ahead of print]

[4] Li S, Chen M, Yu D, Ren S, Sun S, Liu L, Ketelaar T, Emons AM, Liu CM(2013).EXO70A1-mediated vesicle trafficking is critical for tracheary element development in Arabidopsis.Plant Cell25(5):1774-86

[5] SUNDa-Peng, SONGFeng, HUANGLi, ZHANGKuo, JI Gang, CHENPing, ZHUPing(2013).In vitro Assembly and Electron Microscopic Analysis of 30 nm Chromatin Fibers.Progress in Biochemistry and Biophysics40(8): 739-747

[6] Xia P, Wang S, Du Y, Zhao Z, Shi L, Sun L, Huang G, Ye B, Li C, Dai Z, Hou N, Cheng X, Sun Q, Li L, Yang X, Fan Z(2013).WASH inhibits autophagy through suppression of Beclin 1 ubiquitination.EMBO J[Epub ahead of print]

[7] Shang Y, Chen L, Liu Z, Wang X, Ma X, Miao L(2013).Cytosolic Ca(2+) as a multifunctional modulator is required for spermiogenesis in Ascaris suum.Protein Cell4(6):456-66

[8] Tian M, Zhu L, Yu D, Wang Y, Sun S, Wang Y(2013).Aggregate transitions in mixtures of anionic sulfonate gemini surfactant with cationic ammonium single-chain surfactant.J Phys Chem B117(1):433-40

[9] Zhang Y, Wang W, Chen J, Zhang K, Gao F, Gao B, Zhang S, Dong M, Besenbacher F, Gong W, Zhang M, Sun F, Feng W(2013).Structural Insights into the Intrinsic Self-Assembly of Par-3 N-Terminal Domain.StructureEpub ahead of print

[10] Zhang K, Wang L, Liu Y, Chan KY, Pang X, Schulten K, Dong Z, Sun F(2013).Flexible interwoven termini determine the thermal stability of thermosomes.Protein CellEpub ahead of print

[11] Liu Z, Chen L, Shang Y, Huang P, Miao L.(2013).The micronutrient element zinc modulates sperm activation through the SPE-8 pathway in Caenorhabditis elegans.Development140(10):2103-7

[12] Fengfeng Niu, Neil Shaw, Yao E. Wang, Lianying Jiao, Wei Ding, Xiaomin Li, Ping Zhu, Halmurat Upur, Songying Ouyang, Genhong Cheng, and Zhi-Jie Liu(2013).Structure of the Leanyer orthobunyavirus nucleoprotein–RNA complex reveals unique architecture for RNA encapsidation.PNASpublished ahead of print

[13] Roy A. Quinlan, Yan Zhang, Andrew Lansbury, Ian Williamson, Ehmke Pohl, and Fei Sun(2013).Changes in the quaternary structure and function of MjHSP16.5 attributable to deletion of the IXI motif and introduction of the substitution, R107G, in the α-crystallin domain.Phil. Trans. R. Soc. B. 368(1617):20120327

[14] Xiaohu Huang, Lei Sun, Shuangxi Ji, Ting Zhao, Wanrui Zhang, Jiejia Xu, Jue Zhangc, Yanru Wang, Xianhua Wang, Clara Franzini-Armstrong, Ming Zheng,and Heping Cheng(2013).Kissing and nanotunneling mediate intermitochondrial communication in the heart.PNAS110(8):2846-51

[15] Xue Wang,Fengting Xu,Jiasen Liu,Bingquan Gao,Yanxin Liu,Yujia Zhai,Jun Ma,Kai Zhang,Timothy S. Baker,Klaus Schulten,Dong Zheng,Hai Pang,Fei Sun(2013).Atomic Model of Rabbit Hemorrhagic Disease Virus by Cryo-Electron Microscopy and Crystallography.PLOS Pathogens |9(1):e1003132

[16] Huijie Zhao,Lei Zhu,Yunlu Zhu,Jingli Cao,Shanshan Li,Qiongping Huang,Tao Xu,Xiao Huang,Xiumin Yan1,Xueliang Zhu(2013).The Cep63 paralogue Deup1 enables massive de novo centriole biogenesis for vertebrate multiciliogenesis.Nature Cell Biology Published online 17 November 2013

[17] Li H, Li Y, Lei Z, Wang K, Guo A.(2013).Transformation of odor selectivity from projection neurons to single mushroom body neurons mapped with dual-color calcium imaging.Proc Natl Acad Sci U S A110(29):12084-9

[18] Li C, Ma C, Xu P, Gao Y, Zhang J, Qiao R, Zhao Y(2013).Effective and Reversible DNA Condensation Induced by a Simple Cyclic/Rigid Polyamine Containing Carbonyl Moiety.J Phys Chem BEpub ahead of print

[19] Baobin Li, Quan Wang, Xijiang Pan, Isabel Fernández de Castro, Yuna Sun, Yu Guo, Xinwei Tao, Cristina Risco, Sen-Fang Sui, and Zhiyong Lou(2013).Bunyamwera virus possesses a distinct nucleocapsid protein to facilitate genome encapsidation.PNASpublished ahead of print

[20] Yang Niu,Cheng Zhang,Zhe Sun,Zhi Hong,Ke Li,Demeng Sun,Yanrui Yang,Changlin Tian,Weimin Gong & Jia-Jia Liu (2013).PtdIns(4)P regulates retromer–motor interaction to facilitate dynein–cargo dissociation at the trans-Golgi network.Nature Cell Biology15(4):417-29

[21] Li-Qiong Xu, Si Wu, Alexander K. Buell, Samuel I. A. Cohen, Li-Jun Chen, Wan-Hui Hu, Sarah A. Cusack, Laura S. Itzhaki, Hong Zhang, Tuomas P. J. Knowles, Christopher M. Dobson, Mark E. Welland, Gary W. Jones and Sarah Perrett(2013).Influence of specific HSP70 domains on fibril formation of the yeast prion protein Ure2.Phil. Trans. R. Soc. B 368(1617):20110410

[22] Haolong C, Du N, Hongchao T, Yang Y, Wei Z, Hua Z, Wenliang Z, Lei S, Po T(2013).Enterovirus 71 VP1 activates calmodulin-dependent protein kinase II and results in the rearrangement of vimentin in human astrocyte cells.PLoS One8(9):e73900

[23] Chunhui Wang, Mingjie Xiao, Xiaoman Liu, Chen Ni, Jianhong Liu, Ulrike Erben, and Zhihai Qin. IFN-g-Mediated Downregulation of LXA4Is Necessary for the Maintenance of Nonresolving Inflammation and Papilloma Persistence. Cancer Res. 73(6), 1742-1751, 2013, (IF=9.329)   致谢

[24] Yan Yan, Wenfeng Zeng, Shujun Song, Fayun Zhang, Wenxi He, Wei Liang, Zhongying Niu. Vitamin C induces periodontal ligament progenitor cell differentiation via activation of ERK pathway mediated by PELP1. Protein & Cell. 6(1-8), 2013  (IF=3.247)  致谢

[25] Liu J, Jiang T, Wei L, Yang X, Wang C, Zhang X, Xu D, Chen Z, Yang F, Li JC., The discovery and identification of a candidate proteomic biomarker of active tuberculosis. BMC Infect Dis. 2013,13(1): 506.

[26] Chen X, Cui Z, Wei S, Hou J, Xie Z, Peng X, et al. Chronic high glucose induced INS-1beta cell mitochondrial dysfunction: a comparative mitochondrial proteome with SILAC. Proteomics. 2013;13:3030-9.

[27] Li X, Chen B, Yoshina S, Cai T, Yang F, Mitani S, Wang X Inactivation of C. elegans aminopeptidase DNPP-1 restores endocytic sorting and recycling in tat-1 mutantsMol Biol Cell. 2013, 24(8):1163-75.

[28] Gan H, Cai T, Lin X, Wu Y, Wang X, Yang F*, Han C*.Integrative proteomic and transcriptomic analyses reveal multiple post-transcriptional regulatory mechanisms of mouse spermatogenesis.Mol Cell Proteomics, 2013, 12(5):1144-57.

[29] Zhang H, Hou J, Cui R, Guo X, Shi Z, Yang F, Dai J., Phosphoproteome analysis reveals an important role for glycogen synthase kinase-3 in perfluorododecanoic acid-induced rat liver toxicity. Toxicol Lett. 2013, 218(1):61-9.

[30] Li C, Xu WC, Xie ZS, Pan K, Hu J, Chen J, et al. Cupric ions induce the oxidation and trigger the aggregation of human superoxide dismutase. PloS one. 2013;8:e65287.

[31] Li F, Zhang H, Sun Y, Pan Y, Zhou J, Wang J. Expanding the genetic code for photoclick chemistry in E. coli, mammalian cells, and A. thaliana. Angew Chem Int Ed Engl. 2013;52:9700-4.

[32] Liu X, Li J, Hu C, Zhou Q, Zhang W, Hu M, et al. Significant expansion of the fluorescent protein chromophore through the genetic incorporation of a metal-chelating unnatural amino acid. Angew Chem Int Ed Engl. 2013;52:4805-9.

[33] Yang G, Chu W, Zhang H, Sun X, Cai T, Dang L, Wang Q, Yu H, Zhong Y, Chen Z, Yang F*, Li Z*., Isolation and identification of mannose-binding proteins and estimation of their abundance in sera from Hepatocellular Carcinoma patients., Proteomics, 2013, 13(5): 878-92.

[34] Na H, Zhang P, Ding Y, Yang L, Wang Y, Zhang H, et al. Proteomic studies of isolated lipid droplets from bacteria, C. elegans, and mammals. Methods in cell biology. 2013;116:1-14.

[35] Wang D, Xue P, Chen XL, Xie ZS, Yang FQ, Zheng L, et al. Angiotensin IV upregulates the activity of protein phosphatase 1alpha in Neura-2A cells. Protein & cell. 2013;4:520-8.

[36] Zhang Q., Xue P., Li H., Bao Y. H., Wu L. H., Chang S., Niu B., Yang F. Q., * and Zhang T., Histone modification mapping in human brain reveals aberrant expression of histone H3 lysine 79 dimethylation in neural tube defects, Neurobiol Dis., 2013, 54: 404–413.

[37] Zhou Q, Hu M, Zhang W, Jiang L, Perrett S, Zhou J, et al. Probing the function of the Tyr-Cys cross-link in metalloenzymes by the genetic incorporation of 3-methylthiotyrosine. Angew Chem Int Ed Engl. 2013;52:1203-7.

[38] Lili Bai,Weibo Yin,Yuhong Chen,Lili Niu,Yongru Sun,etal. A new strategy to produce a defensin: stable production of mutated NP-1 in nitrate reductase-deficient Chlorella ellipsoidea. PLOS ONE, 2013,8(1),1-9.

[39] Yang D, Fang Q, Wang M, Ren R, Wang H, He M, et al. Nalpha-acetylated Sir3 stabilizes the conformation of a nucleosome-binding loop in the BAH domain. Nature structural & molecular biology. 2013;20:1116-8.

[40] Zhou Q, Hu M, Zhang W, Jiang L, Perrett S, Zhou J, et al. Probing the function of the Tyr-Cys cross-link in metalloenzymes by the genetic incorporation of 3-methylthiotyrosine. Angew Chem Int Ed Engl.2013.

[41] Liu J, Jiang T, Wei L, Yang X, Wang C, Zhang X, et al. The discovery and identification of a candidate proteomic biomarker of active tuberculosis. BMC infectious diseases. 2013.

[42] Ping Yin1,2*, Quanxiu Li1,2*, Chuangye Yan2,3, Ying Liu1,2, Junjie Liu2,3, Feng Yu4, ZhengWang5, Jiafu Long5, Jianhua He4, Hong-Wei Wang2,3, Jiawei Wang1,2, Jian-Kang Zhu6,7, Yigong Shi2,3 & Nieng Yan1,2 Structural basis for the modular recognition of single-stranded RNA by PPR proteins. N AT U R E | VO L 0 0 0 | 0 0 MO N T H 2 0 1 3

[43] Xiaohong Liu , Jiasong Li , Cheng Hu, Qing Zhou, Wei Zhang, Meirong Hu, Juanzuo Zhou, Jiangyun Wang,Significant Expansion of the Fluorescent Protein Chromophore through the Genetic Incorporation of a Metal-Chelating Unnatural Amino Acid, Angewandte Chemie International EditionArticle first published online: 28 MAR 2013DOI: 10.1002/anie.201301307

[44] Niu, F., Shaw, N. , Wang, Y. , Jiao, L. $, Ding, W., Li, X., Zhu, P., Upur, H., OuYang, S*, Cheng, G*, and Liu, Z. J*, (2013) Structure of the Leanyer Orthobunyavirus Nucleoprotein-RNA complex reveals novel architecture for RNA encapsidation, PNAS,2013 May 28;110(22):9054-9. doi: 10.1073/pnas.1300035110

[45] Ru, H. , Ni, X. , Zhao, L. , Crowley, C., Ding, W., Hung, L., Shaw, N., Cheng, G*. and Liu, Z. J*, (2013) Structural basis for termination of AIM2-mediated signaling by p202. Cell Research, 2013 Jun;23(6):855-8. doi: 10.1038/cr.2013.52. .

[46] Jiao, L. $, OuYang, S. $, Liang, M. $, Niu, F. $, Shaw, N., Wu, W., Ding, W., Jin, C., Peng, Y., Zhu, Y., Zhang, F., Wang, T., Li, C., Zuo, X., Luan, C.*, Li., D.*, and Liu, Z. J*, (2013) Structure of Severe Fever with Thrombocytopenia Syndrome Virus Nucleocapsid protein in Complex with Suramin Reveals Therapeutic Potentials. J. VI, 2013 Jun;87(12):6829-39. doi: 10.1128/JVI.00672-13.

[47] Niu F, Ru H, Ding W, Ouyang S*, Liu Z*(2013)  Structural biology study of human TNF receptor associated  factor 4 TRAF domain. Protein Cell. 2013 Aug 27. 2013, 4(9): 687-69

[48] Wang LLi JWang XLiu WZhang XCLi XRao Z. Structure analysis of the extracellular domain reveals disulfide bond forming-protein properties of Mycobacterium tuberculosis Rv2969c. Protein Cell. 2013 Aug;4(8):628-40. doi: 10.1007/s13238-013-3033-x. Epub 2013 Jul 5

[49] Li JDong YLü XWang LPeng WZhang XCRao Z. Crystal structures and biochemical studies of human lysophosphatidic acid phosphatase type 6. Protein Cell. 2013 Jul;4(7):548-61. doi: 10.1007/s13238-013-3031-z. Epub 2013 Jun 26.

[50] Yao Sun1,2*, Xiangxi Wang1,2*, Shuai Yuan1,2, Minghao Dang1,2, Xuemei Li1, Xuejun C. Zhang1, Zihe Rao1. An open conformation determined by a structural switch for 2A protease from coxsackievirus A16. Protein Cell 2013, 4(10): 782–792

[51] Jiang D, Zhao Y, Wang X, Fan J, Heng J, Liu X, Feng W, Kang X, Huang B, Liu J, Zhang XC, Structure of the YajR transporter suggests a transport mechanism based on the conserved motif A, Proc Natl Acad Sci USA. 2013, 110(36):14664-9

[52] Liu X, Niu C, Ren J, Zhang J, Xie X, Zhu H, Feng W, Gong W, The RRM domain of human fused in sarcoma protein reveals a non-canonical nucleic acid binding site, Biochim Biophys Acta., 2013, 1832(2):375-85

[53] Wang TDing JZhang YWang da CLiu W. Complex structure of type VI peptidoglycan muramidase effector and a cognate immunity protein. Acta Crystallogr D Biol Crystallogr. 2013; 69: 1889-900.

[54] Wei Liang, Chrysin promotes osteogenic differentiation via ERK/MAPK activationProtein & Cell,2013(4).(IF=3.22)

[55] Wei Liang, Vitamin C induces periodontal ligament progenitor cell differentiation via activation of ERK pathway mediated by PELP1. Protein & Cell,2013.(IF=3.22)

[56] Wenjun Liu, The Differential Antiviral Activities of Chicken Interferon a (ChIFN-a) and ChIFN-b are Related to Distinct Interferon-Stimulated Gene Expression. PLos One,2013(8).(IF=3.73)

[57] Guangxia Gao, ZAP Inhibits Murine Gammaherpes virus 68 ORF64 Expression and Is Antagonized by RTA. Journal of Virology,2013(87).(IF=5.076)

[58] Zusen Fan, Granzyme H of Cytotoxic Lymphocytes Is Required for Clearance of the Hepatitis B Virus through Cleavage of the Hepatitis B Virus X Protein. Journal of Immunology,2013(11).(IF=5.52)

[59] XIyun Yan, MicroRNA 329 Suppresses Angiogenesis by Targeting CD146.Molecular and Cellar Biology, 2013(7).(IF=5.372)

[60] Zhihai Qin, Interferon-gamma negatively regulates Th17-mediated immunopathology during mouse hepatitis virus infection. 2013(1).(IF=8.65)

[61] Yongdeng Zhang, Lusheng Gu, Hao Chang, Wei Ji, Yan Chen, Mingshu Zhang, Lu Yang, Bei Liu, Liangyi Chen, Tao Xu. Ultrafast, accurate, and robust localization of anisotropic dipoles. Protein Cell 2013, 4(8): 598–606